SNRinCCFlow

Parameters

data_files : string

Path to the dwi.nii.gz file. This path may contain wildcards to process multiple inputs at once.

bvals_files : string

Path of bvals.

bvecs_files : string

Path of bvecs.

mask_files : string

Path of brain mask

bbox_threshold : variable float, optional

Threshold for bounding box, values separated with commas for ex. [0.6,1,0,0.1,0,0.1]. (default (0.6, 1, 0, 0.1, 0, 0.1))

out_dir : string, optional

Where the resulting file will be saved. (default ‘’)

out_file : string, optional

Name of the result file to be saved. (default ‘product.json’)

out_mask_cc : string, optional

Name of the CC mask volume to be saved (default ‘cc.nii.gz’)

out_mask_noise : string, optional

Name of the mask noise volume to be saved (default ‘mask_noise.nii.gz’)