Reconstruction

Below, an overview of all reconstruction models available on DIPY.

Note: Some reconstruction models do not have a tutorial yet

Applying positivity constraints to Q-space Trajectory Imaging (QTI+)

Applying positivity constraints to Q-space Trajectory Imaging (QTI+)

Continuous and analytical diffusion signal modelling with 3D-SHORE

Continuous and analytical diffusion signal modelling with 3D-SHORE

Reconstruct with Diffusion Spectrum Imaging

Reconstruct with Diffusion Spectrum Imaging

DSI Deconvolution vs DSI

DSI Deconvolution vs DSI

Calculate SHORE scalar maps

Calculate SHORE scalar maps

Reconstruct with Generalized Q-Sampling Imaging

Reconstruct with Generalized Q-Sampling Imaging

Reconstruct with Constant Solid Angle (Q-Ball)

Reconstruct with Constant Solid Angle (Q-Ball)

Reconstruction with the Sparse Fascicle Model

Reconstruction with the Sparse Fascicle Model

Calculate DSI-based scalar maps

Calculate DSI-based scalar maps

Reconstruction of the diffusion signal with the kurtosis tensor model

Reconstruction of the diffusion signal with the kurtosis tensor model

K-fold cross-validation for model comparison

K-fold cross-validation for model comparison

Reconstruct with Q-space Trajectory Imaging (QTI)

Reconstruct with Q-space Trajectory Imaging (QTI)

Reconstruction of the diffusion signal with the Tensor model

Reconstruction of the diffusion signal with the Tensor model

Crossing invariant fiber response function with FORECAST model

Crossing invariant fiber response function with FORECAST model

Using the RESTORE algorithm for robust tensor fitting

Using the RESTORE algorithm for robust tensor fitting

Reconstruction of the diffusion signal with the WMTI model

Reconstruction of the diffusion signal with the WMTI model

Signal Reconstruction Using Spherical Harmonics

Signal Reconstruction Using Spherical Harmonics

Using the free water elimination model to remove DTI free water contamination

Using the free water elimination model to remove DTI free water contamination

Intravoxel incoherent motion

Intravoxel incoherent motion

Reconstruction with Constrained Spherical Deconvolution

Reconstruction with Constrained Spherical Deconvolution

Reconstruction with Multi-Shell Multi-Tissue CSD

Reconstruction with Multi-Shell Multi-Tissue CSD

Continuous and analytical diffusion signal modelling with MAP-MRI

Continuous and analytical diffusion signal modelling with MAP-MRI

Mean signal diffusion kurtosis imaging (MSDKI)

Mean signal diffusion kurtosis imaging (MSDKI)

Reconstruction with Robust and Unbiased Model-BAsed Spherical Deconvolution

Reconstruction with Robust and Unbiased Model-BAsed Spherical Deconvolution

Estimating diffusion time dependent q-space indices using qt-dMRI

Estimating diffusion time dependent q-space indices using qt-dMRI