GitHub stats for 2018/12/12 - 2019/03/10 (tag: 0.15.0) These lists are automatically generated, and may be incomplete or contain duplicates. The following 14 authors contributed 361 commits. Ariel Rokem Bramsh Qamar Clément Zotti Eleftherios Garyfallidis Francois Rheault Gabriel Girard Jean-Christophe Houde Jon Haitz Legarreta Gorroño Katrin Leinweber Kesshi Jordan Parichit Sharma Serge Koudoro Shreyas Fadnavis Yijun Liu We closed a total of 103 issues, 41 pull requests and 62 regular issues;
this is the full list (generated with the script
Pull Requests (41): PR #1755: Bundle Analysis and Linear mixed Models Workflows PR #1748: [REBASED ] Symmetric Diffeomorphic registration workflow PR #1714: DOC: Add Cython style guideline for DIPY. PR #1726: IVIM MIX Model (MicroLearn) PR #1753: BF: Fixes #1751, by adding a scale key-word arg to decfa PR #1743: Horizon PR #1749: [Fix] Tutorial syntax PR #1739: IVIM Workflow PR #1695: A few tractometry functions PR #1741: [Fix] Pre-build : From relative to absolute import PR #1742: [REBASED] Apply Transform Workflow PR #1745: Adjust number of threads for SLR in Recobundles PR #1746: [DOC] Add NIH to sponsor list PR #1735: [Rebase] Affine Registration Workflow with Supporting Quality Metrics PR #1738: [FIX] Python 3 compatibility for some tools script PR #1740: [FIX] mapmri with cvxpy 1.0.15 PR #1730: [Fix] Cython syntax error PR #1666: Remove the points added outside of a mask. Fix the related tests. PR #1737: Doc Fix PR #1733: Minor Doc Fix PR #1732: MAIIncrement Python version for testing to 3.6 PR #1716: DOC: Add Imports section on package shorthands recommendations. PR #1640: Workflows - Adding PFT, probabilistic, closestpeaks tracking PR #1652: Switching tests to pytest PR #1720: [WIP] DIPY Workshop link on current website PR #1719: BF: Syntax fix example images not rendering PR #1715: DOC: Avoid the bullet points being interpreted as quoted blocks. PR #1706: BUG: Fix Cython one-liner non-trivial type declaration warnings. PR #1705: BUG: Fix Numpy .random.random_integer deprecation warning. PR #1704: DOC: Fix typo in linear_fascicle_evaluation.py script. PR #1701: BUG: Fix Sphinx math notation documentation warnings. PR #1707: BUG: Address numpy.matrix PendingDeprecation warnings. PR #1703: BUG: Fix blank image being recorded at linear_fascicle_evaluation.py. PR #1700: DOC: Use triple double-quoted strings for docstrings. PR #1708: BF: Clip the values before passing to arccos, instead of fixing nans. PR #1710: DOC: fix typo in instruction below sample snippet PR #1702: BUG: Fix dipy.io.trackvis deprecation warnings. PR #1697: Hyperlink DOIs to preferred resolver PR #1696: Transfer release notes to a specific folder PR #1690: Typo in release notes PR #1693: Changed the GSoC conduction years Issues (62): #1757: NI Learn info from sensors designed to acseptible eeg format? #1755: Bundle Analysis and Linear mixed Models Workflows #1748: [REBASED ] Symmetric Diffeomorphic registration workflow #1714: DOC: Add Cython style guideline for DIPY. #1726: IVIM MIX Model (MicroLearn) #1751: Scale values in decfa #1753: BF: Fixes #1751, by adding a scale key-word arg to decfa #1754: DeprecationWarning: This function is deprecated. Please call randint(0, 10000 + 1) instead C:UsersranjiAnaconda3libsite-packagesipykernel_launcher.py:14: DeprecationWarning: imsave is deprecated! imsave is deprecated in SciPy 1.0.0, and will be removed in 1.2.0. Use #1743: Horizon #1749: [Fix] Tutorial syntax #1616: Implementing the Diffeomorphic registration #1739: IVIM Workflow #1695: A few tractometry functions #1741: [Fix] Pre-build : From relative to absolute import #1742: [REBASED] Apply Transform Workflow #1745: Adjust number of threads for SLR in Recobundles #1746: [DOC] Add NIH to sponsor list #1605: Cleaned PR for Apply Transform Workflow to quickly register a set of moving NIFTI images using a given affine matrix. #1735: [Rebase] Affine Registration Workflow with Supporting Quality Metrics #1738: [FIX] Python 3 compatibility for some tools script #1740: [FIX] mapmri with cvxpy 1.0.15 #1730: [Fix] Cython syntax error #1661: Local Tracking - BinaryTissueClassifier - dropping the last point #1666: Remove the points added outside of a mask. Fix the related tests. #1737: Doc Fix #1604: Cleaned PR for Affine Registration Workflow with Supporting Quality Metrics #1734: Documentation Error #1733: Minor Doc Fix #1565: New warnings with PRE=1 #1732: MAIIncrement Python version for testing to 3.6 #1716: DOC: Add Imports section on package shorthands recommendations. #1640: Workflows - Adding PFT, probabilistic, closestpeaks tracking #1729: N3/N4 Bias correction? #1652: Switching tests to pytest #1280: Switch testing to pytest? #1727: Upgrade Scipy for MIX framework? #1723: Failure on #1720: [WIP] DIPY Workshop link on current website #1718: cannot import name window #1719: BF: Syntax fix example images not rendering #1717: cannot import packages of dipy.viz #1715: DOC: Avoid the bullet points being interpreted as quoted blocks. #1706: BUG: Fix Cython one-liner non-trivial type declaration warnings. #1705: BUG: Fix Numpy .random.random_integer deprecation warning. #1664: Deprecation warnings on testing #1704: DOC: Fix typo in linear_fascicle_evaluation.py script. #1701: BUG: Fix Sphinx math notation documentation warnings. #1707: BUG: Address numpy.matrix PendingDeprecation warnings. #1633: Blank png saved/displayed on documentation #1703: BUG: Fix blank image being recorded at linear_fascicle_evaluation.py. #1700: DOC: Use triple double-quoted strings for docstrings. #1708: BF: Clip the values before passing to arccos, instead of fixing nans. #1698: test failure in travis #1710: DOC: fix typo in instruction below sample snippet #1702: BUG: Fix dipy.io.trackvis deprecation warnings. #1697: Hyperlink DOIs to preferred resolver #1696: Transfer release notes to a specific folder #1691: Doc folder for release notes #1690: Typo in release notes #1693: Changed the GSoC conduction years #1692: Minor doc fix #1632: Link broken on websiteRelease notes for DIPY version 0.16
tools/github_stats.py):
imageio.imwrite instead.